Publications
2024
S.J. Otto, L. Teichmann, N. Fante, P. Crauwels, A. Grünberger, T. Neddermann and C.U. Riedel. High-throughput detection of potential bacteriocin producers in a large strain library using live fluorescent biosensors. Front. Bioeng. Biotechnol. Jul 2024;12:1405202. doi: 10.3389/fbioe.2024.1405202.
V. Steier, M. Osthege, L.M. Helleckes, M. Siska, E. von Lieres, W. Wiechert, S.J. Reich, C.U. Riedel and M. Oldiges. Quantification of nisin concentration from fluorescence-based antimicrobial activity assay using Bayesian calibration. Biotechnol. Prog. Jul 2024;e3495. doi: 10.1002/btpr.3495.
N. Fante, C.K. Desiderato, C.U. Riedel, A. Grünberger. Time-resolved cell-to-cell heterogeneity of Listeria innocua after nisin exposure. Front Bioeng Biotechnol. 2024 Jun 12;12:1408652. doi: 10.3389/fbioe.2024.1408652.
T. Schoch, S.J. Reich, M. Flaiz, S. Stöferle, C.U. Riedel, P. Dürre. Catenovulum adriaticum sp. nov., isolated from algae in the harbour of Susak, Croatia. Int J Syst Evol Microbiol. 2024 May;74(5). doi: 10.1099/ijsem.0.006361.
V. Steier, L. Prigolovkin, A. Reiter, T. Neddermann, W. Wiechert, S.J. Reich, C.U. Riedel, M. Oldiges. Automated workflow for characterization of bacteriocin production in natural producers Lactococcus lactis and Latilactobacillus sakei. Microb Cell Fact. 2024 Mar 3;23(1):74. doi: 10.1186/s12934-024-02349-6.
C.K. Desiderato, C. Müller, A. Schretzmeier, K.M. Hasenauer, B. Gnannt, B. Süpple, A. Reiter, V. Steier, M. Oldiges, B.J. Eikmanns, C.U. Riedel. Optimized recombinant production of the bacteriocin garvicin Q by Corynebacterium glutamicum. Front Microbiol. 2024 Jan 8;14:1254882. doi: 10.3389/fmicb.2023.1254882.
2023
J. Christmann, P. Cao, J. Becker, C.K. Desiderato, O. Goldbeck, C.U. Riedel, M. Kohlstedt, C. Wittmann. High-efficiency production of the antimicrobial peptide pediocin PA-1 in metabolically engineered Corynebacterium glutamicum using a microaerobic process at acidic pH and elevated levels of bivalent calcium ions. Microb Cell Fact. 2023 Feb 27;22(1):41. doi: 10.1186/s12934-023-02044-y.
E. Pashou, S.J. Reich, A. Reiter, D. Weixler, B.J. Eikmanns, M. Oldiges, C.U. Riedel*, O. Goldbeck. Identification and Characterization of Corynaridin, a Novel Linaridin from Corynebacterium lactis. Microbiol Spectr. 2023 Feb 14;11(1):e0175622. doi: 10.1128/spectrum.01756-22. * corresponding author
2022
C.K. Desiderato, K.M. Hasenauer, S.J. Reich, O. Goldbeck, L. Holivololona, K.V. Ovchinnikov, A. Reiter, M. Oldiges, D.B. Diep, B.J. Eikmanns, C.U. Riedel. Garvicin Q: characterization of biosynthesis and mode of action. Microb Cell Fact. 2022 Nov 11;21(1):236. doi: 10.1186/s12934-022-01952-9.
V. Vogel V, L.R. Olari, M. Jachmann, S.J. Reich, M. Häring, A.K. Kissmann, F. Rosenau, C.U. Riedel, J. Münch, B. Spellerberg. The bacteriocin Angicin interferes with bacterial membrane integrity through interaction with the mannose phosphotransferase system. Front Microbiol. 2022 Sep 6;13:991145. doi: 10.3389/fmicb.2022.991145.
A. Suwandi, K.G. Alvarez, A. Galeev, N. Steck, C.U. Riedel, J.L. Puente, J.F. Baines, G.A. Grassl. B4galnt2-mediated host glycosylation influences the susceptibility to Citrobacter rodentium infection. Front Microbiol. 2022 Aug 11;13:980495. doi: 10.3389/fmicb.2022.980495.
K.V. Ovchinnikov, T.F. Oftedal, S.J. Reich, N.S. Bar, H. Holo, M. Skaugen, C.U. Riedel, D.B. Diep. Genome-assisted Identification, Purification, and Characterization of Bacteriocins. Bio-protocol 2022; 12(14):e4477. doi: 10.21769/BioProtoc.4477
S.J. Reich, J. Stohr, O. Goldbeck, B. Fendrich, P. Crauwels, C.U. Riedel. Improved fluorescent Listeria spp. biosensors for analysis of antimicrobials by flow cytometry. MicrobiologyOpen 2022 Aug;11(4):e1304. doi: 10.1002/mbo3.1304D.
Weixler, M. Berghoff, K.V. Ovchinnikov, S. Reich, O. Goldbeck, G.M. Seibold, C. Wittmann, N.S. Bar, B.J. Eikmanns, D.B. Diep, C.U. Riedel. Recombinant production of the lantibiotic nisin using Corynebacterium glutamicum in a two-step process. Microb Cell Fact. 2022 Jan 15;21(1):11. doi: 10.1186/s12934-022-01739-y.
H. Melhem, B. Kaya, T. Kaymak, P. Wuggenig, E. Flint, J. Roux, K.C. Oost, C. Cavelti-Weder, M.L. Balmer, J.C. Walser, R.A. Morales, C.U. Riedel, P. Liberali, E.J. Villablanca, J.H. Niess. Epithelial GPR35 protects from Citrobacter rodentium infection by preserving goblet cells and mucosal barrier integrity. Mucosal Immunol. 2022 Mar;15(3):443-458. doi: 10.1038/s41385-022-00494-y.
2021
T.F. Oftedal, K. Ovchinnikov, K.A. Hestad, O. Goldbeck, D. Porcellato, J. Narvhus, C.U. Riedel, M. Kjos, D.B. Diep. Ubericin K, a New Pore-Forming Bacteriocin Targeting Mannose-PTS. Microbiol Spectr. 2021 Oct 31;9(2):e0029921. doi: 10.1128/Spectrum.00299-21.
O. Goldbeck, D.N. Desef, K.V. Ovchinnikov, F. Perez-Garcia, J. Christmann, P. Sinner, P. Crauwels, D. Weixler, P. Cao, J. Becker, M. Kohlstedt, J. Kager, B.J. Eikmanns, G.M. Seibold, C. Herwig, C. Wittmann, N.S. Bar, D.B. Diep, C.U. Riedel. Establishing recombinant production of pediocin PA-1 in Corynebacterium glutamicum. Metabolic Engineering. 2021 Sep 4:S1096-7176(21)00141-5. doi: 10.1016/j.ymben.2021.09.002. Online ahead of print. pubmed
C.K. Desiderato, S. Sachsenmaier, K.V. Ovchinnikov, J. Stohr, S. Jacksch, D.N. Desef, P. Crauwels, M. Egert, D.B. Diep, O. Goldbeck, C.U. Riedel. Identification of Potential Probiotics Producing Bacteriocins Active against Listeria monocytogenes by a Combination of Screening Tools. International Journal of Molecular Sciences. 2021 Aug 10;22(16):8615. doi: 10.3390/ijms22168615. pubmed
D. Weixler, O. Goldbeck, G.M. Seibold, B.J. Eikmanns, C.U. Riedel. Towards improved resistance of Corynebacterium glutamicum against nisin. bioRxiv. 2021.08.09.454123. doi: https://doi.org/10.1101/2021.08.09.454123
B. Nikparvar, A. Subires, M. Capellas, M. Hernandez-Herrero, P. Crauwels, C.U. Riedel, N. Bar. A Diffusion Model to Quantify Membrane Repair Process in Listeria monocytogenes Exposed to High Pressure Processing Based on Fluorescence Microscopy Data. Frontiers in Microbiology. 2021 May 13;12:598739. doi: 10.3389/fmicb.2021.598739. pubmed
I.C. Duru, F.I. Bucur, M. Andreevskaya, A. Ylinen, P. Crauwels, L. Grigore-Gurgu, B. Nikparvar, T.M. Rode, P. Laine, L. Paulin, T. Løvdal, C.U. Riedel, N. Bar, D. Borda, A.I. Nicolau, P. Auvinen. The complete genome sequence of Listeria monocytogenes strain S2542 and expression of selected genes under high-pressure processing. BMC Res Notes. 2021 Apr 15;14(1):137. doi: 10.1186/s13104-021-05555-2. pubmed
B. Nikparvar, M. Andreevskaya, I.C. Duru, F.I. Bucur, L. Grigore-Gurgu, D. Borda, A.I. Nicolau, C.U. Riedel, P. Auvinen, N. Bar. Analysis of temporal gene regulation of Listeria monocytogenes revealed distinct regulatory response modes after exposure to high pressure processing. BMC Genomics. 2021 Apr 14;22(1):266. doi: 10.1186/s12864-021-07461-0. pubmed
O. Goldbeck, D. Weixler, B.J. Eikmanns, C.U. Riedel. In Silico Prediction and Analysis of Unusual Lantibiotic Resistance Operons in the Genus Corynebacterium. Microorganisms. 2021 Mar 19;9(3):646. doi: 10.3390/microorganisms9030646. pubmed
V. Palmieri, J.-F. Ebel, N. Ngo Thi Phuong, R. Klopfleisch, V. Pham Vu, A. Adamczyk, J. Zöller, C. Riedel, J. Buer, P. Krebs, W. Hansen, E. Pastille, A.M. Westendorf. Interleukin-33 signaling exacerbates experimental infectious colitis by enhancing gut permeability and inhibiting protective Th17 immunity. Mucosal Immunology. 2021. 2021 Jul;14(4):923-936. doi: 10.1038/s41385-021-00386-7. pubmed
I.C. Duru, F.I. Bucur, M. Andreevskaya, B. Nikparvar, A. Ylinen, L. Grigore-Gurgu, T.M. Rode, P. Crauwels, P. Laine, L. Paulin, T. Løvdal, C.U. Riedel, N. Bar, D. Borda, A.I. Nicolau, P. Auvinen. High-pressure processing-induced transcriptome response during recovery of Listeria monocytogenes. BMC Genomics. 2021 Feb 12;22(1):117. doi: 10.1186/s12864-021-07407-6. pubmed
2020
I.C. Duru, M. Andreevskaya, P. Laine, T.M. Rode, A. Ylinen, T. Løvdal, N. Bar, P. Crauwels, C.U. Riedel, I.F. Bucur, A. Nicolau, P. Auvinen. Genomic characterization of the most barotolerant Listeria monocytogenes RO15 strain compared to reference strains used to evaluate food high pressure processing. BMC Genomics. 2020 Jul 2;21(1):455. doi: 10.1186/s12864-020-06819-0. pubmed
Further selected publications
P. Crauwels, L. Schäfer, D. Weixler, N.S. Bar, D.B. Diep, C.U. Riedel*, G.M. Seibold. Intracellular pHluorin as sensor for easy assessment of bacteriocin-induced membrane-damage in Listeria monocytogenes. Front Microbiol. 2018 Dec 11. doi: 0.3389/fmicb.2018.03038. * corresponding author
M. Zetzmann, A. Sánchez-Kopper, M.S. Waidmann, B. Blombach, C.U. Riedel. Identification of the agr Peptide of Listeria monocytogenes. Front Microbiol. 2016 Jun 22;7:989.
M. Zetzmann, M. Okshevsky, J. Endres, A. Sedlag, N. Caccia, M. Auchter, M.S. Waidmann, M. Desvaux, R.L. Meyer, C.U. Riedel. DNase-Sensitive and -Resistant Modes of Biofilm Formation by Listeria monocytogenes. Front. Microbiol. 2015 Dec 22;6:1428.
A. Osswald, Z. Sun, V. Grimm, G. Ampem, K. Riegel, A.M. Westendorf, W. Sommergruber, K. Otte, P. Dürre, C.U. Riedel. Three-dimensional tumor spheroids for in vitro analysis of bacteria as gene delivery vectors in tumor therapy. Microb Cell Fact. 2015 Dec 12;14(1):199.
Z. Sun, V. Grimm, C.U. Riedel. AI-2 to the rescue against antibiotic-induced intestinal dysbiosis? Trends Microbiol. 2015 Jun;23(6):327-8.
V. Grimm, M. Gleinser, C. Neu, D. Zhurina, C.U. Riedel. Expression of fluorescent proteins in bifidobacteria for analysis of host-microbe interaction. Appl Environ Microbiol. 2014 May;80(9):2842-50.
Z. Sun, A. Baur, D. Zhurina, J. Yuan, C.U. Riedel. Accessing the inaccessible: molecular tools for bifidobacteria. Appl Environ Microbiol. 2012 Aug;78(15):5035-42.
M. Gleinser, V. Grimm, D. Zhurina, J. Yuan, C.U. Riedel. Improved adhesive properties of recombinant bifidobacteria expressing the Bifidobacterium bifidum-specific lipoprotein BopA. Microb Cell Fact. 2012 Jun 13;11:80.
C.U. Riedel, I.R. Monk, P.G. Casey, M.S. Waidmann, C.G.M. Gahan, and C. Hill. AgrD-dependent quorum sensing affects biofilm formation, invasion, virulence and global gene expression profiles in Listeria monocytogenes. Mol Microbiol. 2009 Mar;71(5):1177-89.
C.U. Riedel, P. Casey. H. Mulcahy, F. O’Gara, C.G.M. Gahan, and C. Hill. Construction of p16Slux, a novel vector for improved bioluminescent-labelling of Gram-negative bacteria. Appl Environ Microbiol. 2007 Nov;73(21):7092-5.
S.C. Corr, Y. Li, C.U. Riedel, P.W. O’Toole, C. Hill, and C.G.M. Gahan. Bacteriocin production as a mechanism for the anti-infective activity of a probiotic bacterium. Proc Nat Acad Sci USA. 2007 May 1;104(18):7617-21.
C.U. Riedel, I.R. Monk, P. Casey, D. Morrissey, G.C. O’Sullivan, M. Tangney, C. Hill and C.G.M. Gahan. An improved luciferase tagging system for Listeria monocytogenes allows real-time monitoring in vivo and in vitro. Appl Environ Microbiol. 2007 May;73(9):3091-4.
C. Riedel, D. Rittmann, P. Dangel, B. Möckel, S. Petersen, H. Sahm, and B.J. Eikmanns. Characterisation of the phosphoenolpyruvate-carboxykinase gene from Corynebacterium glutamicum and significance of the enzyme for growth and amino acid production. J Mol Microbiol Biotechnol. 2001 Oct;3(4):573-83.